Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907849.1_cds_XP_016457948.1_51619
CDS Infomation

[gene=LOC107781721] [db_xref=GeneID:107781721] [protein=auxin response factor 16-like] [protein_id=XP_016457948.1] [location=join(574..1695,2121..3019,3117..3186)] [gbkey=CDS]
Sequence

ATGATAAATATTATGAATCCAGTGAACAAACCTATGAATGAAGTGGAGAAAGGATTGGAT
CCTCAGTTATGGCATGCCTGTGCTGGTGGTATGGTCCAAATGCCACCACTGAACTCAAAA
GCCTTTTACTTTCCTCAGGGACATGCTGAACATGCCCACAAGAACGTTGATTTTGGGGGT
TTCCCTAAAATTCCACCACTTACTCTTTGTAGGGTGTCATCCATTAGGTACTTGGCTGAT
ACTGAGACTGATGAGGTCTATGCCAAGATAAGATTGGTTCCATTGAAAGGTAAAGAATGT
GATGTTGAAGATGATGCTGGATTTCTAGGACTTGATAAGAATGAAAATCAAGAGAAACCT
AATTCATTTGCTAAGACATTGACACAGTCTGATGCTAACAATGGTGGGGGGTTTTCTGTG
CCAAGATATTGCGCTGAGACCATATTTCCACGGCTGGATTACTCGGCTGAGCCTCCTGTC
CAGACCATTTTGGCTAAGGATGTTCATGGGGAGGTTTGGAAGTTTAGGCATATTTATAGG
GGGACACCAAGGCGGCATCTTTTAACGACTGGATGGAGCAACTTTGTGAACCAGAAGAAG
CTTGTTGCAGGGGATTCGATTGTGTTCTTGAGGGCGGAAAATGGGGATCTTTGTGTTGGG
ATCCGTAGGGCGAAGAGGGGGATTGGTAGCGGACAGGAGGTGCCCTCCGGATGGAATACT
GGACCAGGGAATTATGCCTCTTCACTTTATCAGGGGTTTCCTGGGTTCTTGAGCGAAGAT
GAGAAGAAGTTCATCCGAAATGGTCAGGCAGCAAAGTCTGATGATGGTATAAGGGGAAAA
GGTAAAGTTATAGCTGAATCTGTCATTGAAGCAGCAAAACTTGCTGCCTGTGGCCAGCCA
TTTGAGGTGGTTTACTATCCCCGAGCAAGCACTCCGGAGTTTATCGTCAAGGCCTCTGCG
GTAAGAGCTGCAATGAGAGTCCAATGGTCTTCTGGGATGAGGTTCAAAATGCCTTTTGAG
ACCGAAGATTCCTCAAGGATTAGCTGGTTCATGGGGACCATATCTTCTGTTCATGTTGAG
GACCCCATCCACTGGCCAAATTCTCCATGGCGCCTTCTCCAGGTGCACTGGGATGAGCCT
GATTTGCTTCAAAATGTGAAGAGAGTGAGTCCATGGTTGGTTGAATTGGTATCAAATATG
CCTCCCATCCATCTCTCTCCGTTCTCACCCCCACGAAAGAAGTTGAGGCTTCCACAACCC
CCTGAATTTCCCATGGTTGGGCAACTCTCAATGTCTTCACTTCTCAACAACCCTTTAAGC
CCCAGCAGCCCTTTGTGTTGTATATCGGACAACATTCCTGCAGGCATACAGGGAGCCAGG
CATGCTCAGTGTGGATTACCGTCATCAGATGTCCACTTCAACAAACTGCAGGCAGGGCTA
CTGCCATTTGGATTCAAAGAACTCGAACGTTCTGTCCCGCCTTCTAGACTTCTTAAAGGC
GGCAGCTTCATTACCAGTTTTGACCATGATAAGAATATATCTTGCCTATTAACCATGGGC
AATACTACTCCCACTTCAACGAAACGTAAGGAAACACAAACACCATCGTTCAAGTTATTC
GGTAAACCAATTCTTACCGAGCAGCAGATGTCCCTGAGCTGCTCTAGTGAAACAGTTGGC
AACGGTTTATCTAATGGGAATCCAGAGAAGATGATGAATGTCTCCGAGGGTTCGGGATCA
GCTGTTATTCATAATGGTCCACCAGAAAATTCTTCAGGTGAGGTACTTCCTTGGTATAAA
GATCAAAAACTTGAATTTGGAATGGAGACTGGTCACTGCAAGGTTTTCATGGAATCCGAG
GATGTAGGCCGAACACTTGATCTTTCAGTCCTTGGCTCGTATGAAGAGTTGTATAAAAAG
GTAGCTGACATGTTTGGTGTTGGAACATCAGAGATGCTAAGCAATGTGCTTTACCAAGAC
TTCACCGGCGCTGTTAAGCACACTGGAGATGAACCATTCGGTCAGTTTGTGAAGACAGCT
AGAAGGCTTACCATCTTAACAGATTCTGGCAGCGATAACATACGGAGATAG

Peptide Sequence

PEP ID

XP_016457948.1
PEP Infomation

PREDICTED: auxin response factor 16-like [Nicotiana tabacum]
Sequence

MINIMNPVNKPMNEVEKGLDPQLWHACAGGMVQMPPLNSKAFYFPQGHAEHAHKNVDFGG
FPKIPPLTLCRVSSIRYLADTETDEVYAKIRLVPLKGKECDVEDDAGFLGLDKNENQEKP
NSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGEVWKFRHIYR
GTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGSGQEVPSGWNT
GPGNYASSLYQGFPGFLSEDEKKFIRNGQAAKSDDGIRGKGKVIAESVIEAAKLAACGQP
FEVVYYPRASTPEFIVKASAVRAAMRVQWSSGMRFKMPFETEDSSRISWFMGTISSVHVE
DPIHWPNSPWRLLQVHWDEPDLLQNVKRVSPWLVELVSNMPPIHLSPFSPPRKKLRLPQP
PEFPMVGQLSMSSLLNNPLSPSSPLCCISDNIPAGIQGARHAQCGLPSSDVHFNKLQAGL
LPFGFKELERSVPPSRLLKGGSFITSFDHDKNISCLLTMGNTTPTSTKRKETQTPSFKLF
GKPILTEQQMSLSCSSETVGNGLSNGNPEKMMNVSEGSGSAVIHNGPPENSSGEVLPWYK
DQKLEFGMETGHCKVFMESEDVGRTLDLSVLGSYEELYKKVADMFGVGTSEMLSNVLYQD
FTGAVKHTGDEPFGQFVKTARRLTILTDSGSDNIRR

Transcript Sequence

Gene sequence data has not been registered.